Fiche membre Retour à l'annuaire
![](http://www.ls2n.fr/wp-content/themes/dk-resp-ls2n/images/annuaire/photoMb77741.jpeg)
Damien EVEILLARD
ENSEIGNANT-CHERCHEUR
ProfessorHDR
: Damien.Eveillardatls2n.fr
Adresse :
Université de Nantes - faculté des Sciences et Techniques ( FST )Petit Port2 Chemin de la HoussinièreBP 92208
44322 Nantes Cedex 3
Batiment 34, étage 3, bureau 310
Publications référencées sur HAL
![](https://hal.archives-ouvertes.fr/img/tamponHal.png)
Revues internationales avec comité de lecture (ART_INT)
- [1] I. Deutschmann, E. Delage, C. Giner, M. Sebastián, J. Poulain, J. Arístegui, C. Duarte, S. Acinas, R. Massana, J. Gasol, D. Eveillard, S. Chaffron, R. Logares. Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. In Nature Communications ; éd. Nature Publishing Group, 2024, vol. 15, num. 1.https://hal.science/hal-04407573
- [2] J. Rolland, R. Boutin, D. Eveillard, B. Delahaye. Datascape: exploring heterogeneous dataspace. In Scientific Reports ; éd. Nature Publishing Group, 2024, vol. 14.https://hal.science/hal-04674835
- [3] A. Lambert, M. Budinich, M. Mahé, D. Eveillard, S. Chaffron. Community metabolic modeling of host-microbiota interactions through multi-objective optimization. In iScience ; éd. Elsevier, 2024, vol. 27, num. 6.https://hal.science/hal-04674843
- [4] M. Gaudin, D. Eveillard, S. Chaffron. Ecological associations distribution modelling of marine plankton at a global scale. In Philosophical Transactions of the Royal Society B: Biological Sciences ; éd. Royal Society, The, 2024, vol. 379.https://hal.science/hal-04674860
- [5] F. Tian, J. Wainaina, C. Howard-Varona, G. Domínguez-Huerta, B. Bolduc, M. Gazitúa, G. Smith, M. Gittrich, O. Zablocki, D. Cronin, D. Eveillard, S. Hallam, M. Sullivan. Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans. In Microbiome ; éd. BioMed Central, 2024, vol. 12, num. 1.https://hal.science/hal-04683447
- [6] I. Deutschmann, A. Krabberød, F. Latorre, E. Delage, C. Marrasé, V. Balagué, J. Gasol, R. Massana, D. Eveillard, S. Chaffron, R. Logares. Disentangling temporal associations in marine microbial networks. In Microbiome ; éd. BioMed Central, 2023, vol. 11, num. 83.https://hal.science/hal-03781901v2
- [7] N. Jiménez, V. Acuña, M. Cortés, D. Eveillard, A. Maass. Unveiling abundance-dependent metabolic phenotypes of microbial communities. In mSystems. 2023https://hal.science/hal-04198586
- [8] H. Doré, U. Guyet, J. Leconte, G. Farrant, B. Alric, M. Ratin, M. Ostrowski, M. Ferrieux, L. Brillet-Guéguen, M. Hoebeke, J. Siltanen, G. Le Corguillé, E. Corre, P. Wincker, D. Scanlan, D. Eveillard, F. Partensky, L. Garczarek. Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies. In The International Society of Microbiologial Ecology Journal ; éd. Nature Publishing Group, 2023, vol. 17, num. 5.https://hal.science/hal-04238382
- [9] J. Rigonato, M. Budinich, A. Murillo, M. Brandão, J. Pierella Karlusich, Y. Soviadan, A. Gregory, H. Endo, F. Kokoszka, D. Vik, N. Henry, P. Frémont, K. Labadie, A. Zayed, C. Dimier, M. Picheral, S. Searson, J. Poulain, S. Kandels, S. Pesant, E. Karsenti, C. Bowler, C. de Vargas, D. Eveillard, M. Gehlen, D. Iudicone, F. Lombard, H. Ogata, L. Stemmann, M. Sullivan, S. Sunagawa, P. Wincker, S. Chaffron, O. Jaillon. Ocean-wide comparisons of mesopelagic planktonic community structures. In ISME Communications ; éd. Springer Nature, 2023, vol. 3, num. 1.https://hal.science/hal-04184772
- [10] A. Régimbeau, M. Budinich, A. Larhlimi, J. Pierella Karlusich, O. Aumont, L. Mémery, C. Bowler, D. Eveillard. Contribution of genome‐scale metabolic modelling to niche theory. In Ecology Letters ; éd. Wiley, 2022, vol. 25, num. 6.https://hal.science/hal-03635158
- [11] G. Dominguez-Huerta, A. Zayed, J. Wainaina, J. Guo, F. Tian, A. Pratama, B. Bolduc, M. Mohssen, O. Zablocki, E. Pelletier, E. Delage, A. Alberti, J. Aury, Q. Carradec, C. da Silva, K. Labadie, J. Poulain, C. Bowler, D. Eveillard, L. Guidi, E. Karsenti, J. Kuhn, H. Ogata, P. Wincker, A. Culley, S. Chaffron, M. Sullivan. Diversity and ecological footprint of Global Ocean RNA viruses. In Science ; éd. American Association for the Advancement of Science (AAAS), 2022, vol. 376, num. 6598.https://hal.science/hal-03781935
- [12] A. Abreu, E. Bourgois, A. Gristwood, R. Troublé, S. Acinas, P. Bork, E. Boss, C. Bowler, M. Budinich, S. Chaffron, C. de Vargas, T. Delmont, D. Eveillard, L. Guidi, D. Iudicone, S. Kandels, H. Morlon, F. Lombard, R. Pepperkok, J. Karlusich, G. Piganeau, A. Régimbeau, G. Sommeria-Klein, L. Stemmann, M. Sullivan, S. Sunagawa, P. Wincker, O. Zablocki, D. Arendt, J. Bilic, R. Finn, E. Heard, B. Rouse, J. Vamathevan, R. Casotti, I. Cancio, M. Cunliffe, A. Kervella, W. Kooistra, M. Obst, N. Pade, D. Power, I. Santi, T. Tsagaraki, J. Vanaverbeke. Priorities for ocean microbiome research. In Nature Microbiology ; éd. Nature Publishing Group, 2022, vol. 7, num. 7.https://hal.science/hal-03781942
- [13] D. Richter, R. Watteaux, T. Vannier, J. Leconte, P. Frémont, G. Reygondeau, N. Maillet, N. Henry, G. Benoit, A. Fernandez-Guerra, S. Suweis, R. Narci, C. Berney, D. Eveillard, F. Gavory, L. Guidi, K. Labadie, E. Mahieu, J. Poulain, S. Romac, S. Roux, C. Dimier, S. Kandels, M. Picheral, S. Searson, S. Pesant, J. Aury, J. Brum, C. Lemaitre, E. Pelletier, P. Bork, S. Sunagawa, L. Karp-Boss, C. Bowler, M. Sullivan, E. Karsenti, M. Mariadassou, I. Probert, P. Peterlongo, P. Wincker, C. de Vargas, M. Ribera d'Alcalà, D. Iudicone, O. Jaillon, T. Delmont. Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems. In eLife ; éd. eLife Sciences Publication, 2022, vol. 11.https://inria.hal.science/hal-02399723v2
- [14] S. Chaffron, E. Delage, M. Budinich, D. Vintache, N. Henry, C. Nef, M. Ardyna, A. Zayed, P. Junger, P. Galand, C. Lovejoy, A. Murray, H. Sarmento, S. Acinas, M. Babin, D. Iudicone, O. Jaillon, E. Karsenti, P. Wincker, L. Karp-Boss, M. Sullivan, C. Bowler, C. de Vargas, D. Eveillard. Environmental vulnerability of the global ocean epipelagic plankton community interactome. In Science Advances ; éd. American Association for the Advancement of Science (AAAS), 2021, vol. 7, num. 35.https://hal.science/hal-03443359v2
- [15] S. Dittami, E. Arboleda, J. Auguet, A. Bigalke, E. Briand, P. Cárdenas, U. Cardini, J. Decelle, A. Engelen, D. Eveillard, C. Gachon, S. Griffiths, T. Harder, E. Kayal, E. Kazamia, F. Lallier, M. Medina, E. Marzinelli, T. Morganti, L. Núñez Pons, S. Prado, J. Pintado, M. Saha, M. Selosse, D. Skillings, W. Stock, S. Sunagawa, E. Toulza, A. Vorobev, C. Leblanc, F. Not. A community perspective on the concept of marine holobionts: current status, challenges, and future directions. In PeerJ ; éd. PeerJ, 2021, vol. 9.https://hal.science/hal-03166872v2
- [16] Y. Lin, C. Moreno, A. Marchetti, H. Ducklow, O. Schofield, E. Delage, M. Meredith, Z. Li, D. Eveillard, S. Chaffron, N. Cassar. Decline in plankton diversity and carbon flux with reduced sea ice extent along the Western Antarctic Peninsula. In Nature Communications ; éd. Nature Publishing Group, 2021, vol. 12.https://hal.science/hal-03389081
- [17] M. Royo-Llonch, P. Sánchez, C. Ruiz-González, G. Salazar, C. Pedrós-Alió, M. Sebastián, K. Labadie, L. Paoli, F. M. Ibarbalz, L. Zinger, B. Churcheward, S. Chaffron, D. Eveillard, E. Karsenti, S. Sunagawa, P. Wincker, L. Karp-Boss, C. Bowler, S. Acinas. Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean. In Nature Microbiology ; éd. Nature Publishing Group, 2021, vol. 6, num. 12.https://hal.science/hal-03781908
- [18] S. Wang, W. Tang, E. Delage, S. Gifford, H. Whitby, A. Gonzalez, D. Eveillard, H. Planquette, N. Cassar. Investigating the microbial ecology of coastal hotspots of marine nitrogen fixation in the western North Atlantic. In Scientific Reports ; éd. Nature Publishing Group, 2021, vol. 11, num. 1.https://hal.science/hal-03166895
- [19] S. Sunagawa, S. Acinas, P. Bork, C. Bowler, S. Acinas, M. Babin, P. Bork, E. Boss, C. Bowler, G. Cochrane, C. de Vargas, M. Follows, G. Gorsky, N. Grimsley, L. Guidi, P. Hingamp, D. Iudicone, O. Jaillon, S. Kandels, L. Karp-Boss, E. Karsenti, M. Lescot, F. Not, H. Ogata, S. Pesant, N. Poulton, J. Raes, C. Sardet, M. Sieracki, S. Speich, L. Stemmann, M. Sullivan, S. Sunagawa, P. Wincker, D. Eveillard, G. Gorsky, L. Guidi, D. Iudicone, E. Karsenti, F. Lombard, H. Ogata, S. Pesant, M. Sullivan, P. Wincker, C. de Vargas. Tara Oceans: towards global ocean ecosystems biology. In Nature Reviews Microbiology ; éd. Nature Publishing Group, 2020, vol. 18, num. 8.https://hal.science/hal-04394809
- [20] A. Murray, N. Avalon, L. Bishop, K. Davenport, E. Delage, A. Dichosa, D. Eveillard, M. Higham, S. Kokkaliari, C. Lo, C. Riesenfeld, R. Young, P. Chain, B. Baker. Uncovering the Core Microbiome and Distribution of Palmerolide in Synoicum adareanum Across the Anvers Island Archipelago, Antarctica. In Marine drugs ; éd. MDPI, 2020, vol. 18, num. 6.https://hal.science/hal-02862365
- [21] C. Lemonnier, M. Perennou, D. Eveillard, A. Fernandez-Guerra, A. Leynaert, L. Marié, H. Morrison, L. Mémery, C. Paillard, L. Maignien. Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area. In Frontiers in Marine Science ; éd. Frontiers Media, 2020, vol. 7.https://hal.science/hal-02938091
- [22] C. Lemonnier, M. Perennou, D. Eveillard, A. Fernandez-Guerra, A. Leynaert, L. Marié, H. Morrison, L. Mémery, C. Paillard, L. Maignien. Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area. In Frontiers in Marine Science ; éd. Frontiers Media, 2020, vol. 7.https://hal.science/hal-03083042
- [23] U. Guyet, N. Nguyen, H. Doré, J. Haguait, J. Pittera, M. Conan, M. Ratin, E. Corre, G. Le Corguillé, L. Brillet-Guéguen, M. Hoebeke, C. Six, C. Steglich, A. Siegel, D. Eveillard, F. Partensky, L. Garczarek. Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803. In Frontiers in Microbiology ; éd. Frontiers Media, 2020, vol. 11.https://hal.sorbonne-universite.fr/hal-02929424
- [24] A. Murray, J. Freudenstein, S. Gribaldo, R. Hatzenpichler, P. Hugenholtz, P. Kämpfer, K. Konstantinidis, C. Lane, R. Papke, D. Parks, R. Rossello-Mora, M. Stott, I. Sutcliffe, J. Thrash, S. Venter, W. Whitman, S. Acinas, R. Amann, K. Anantharaman, J. Armengaud, B. Baker, R. Barco, H. Bode, E. Boyd, C. Brady, P. Carini, P. Chain, D. Colman, K. Deangelis, M. de Los Rios, P. Estrada-de Los Santos, C. Dunlap, J. Eisen, D. Emerson, T. Ettema, D. Eveillard, P. Girguis, U. Hentschel, J. Hollibaugh, L. Hug, W. Inskeep, E. Ivanova, H. Klenk, W. Li, K. Lloyd, F. Löffler, T. Makhalanyane, D. Moser, T. Nunoura, M. Palmer, V. Parro, C. Pedrós-Alió, A. Probst, T. Smits, A. Steen, E. Steenkamp, A. Spang, F. Stewart, J. Tiedje, P. Vandamme, M. Wagner, F. Wang, P. Yarza, B. Hedlund, A. Reysenbach. Roadmap for naming uncultivated Archaea and Bacteria. In Nature Microbiology ; éd. Nature Publishing Group, 2020, vol. 5, num. 8.https://hal.science/hal-02863761v2
- [25] H. Doré, G. Farrant, U. Guyet, J. Haguait, F. Humily, M. Ratin, F. Pitt, M. Ostrowski, C. Six, L. Brillet-Guéguen, M. Hoebeke, A. Bisch, G. Le Corguillé, E. Corre, K. Labadie, J. Aury, P. Wincker, D. Choi, J. Noh, D. Eveillard, D. Scanlan, F. Partensky, L. Garczarek. Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria. In Frontiers in Microbiology ; éd. Frontiers Media, 2020, vol. 11.https://hal.science/hal-02938656
- [26] S. Ramondenc, D. Eveillard, L. Guidi, F. Lombard, B. Delahaye. Probabilistic modeling to estimate jellyfish ecophysiological properties and size distributions. In Scientific Reports ; éd. Nature Publishing Group, 2020, vol. 10, num. 1.https://hal.science/hal-02539195
- [27] A. Capotondi, M. Jacox, C. Bowler, M. Kavanaugh, P. Lehodey, D. Barrie, S. Brodie, S. Chaffron, W. Cheng, D. Dias, D. Eveillard, L. Guidi, D. Iudicone, N. Lovenduski, J. Nye, I. Ortiz, D. Pirhalla, M. Pozo Buil, V. Saba, S. Sheridan, S. Siedlecki, A. Subramanian, C. de Vargas, E. Di Lorenzo, S. Doney, A. Hermann, T. Joyce, M. Merrifield, A. Miller, F. Not, S. Pesant. Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems. In Frontiers in Marine Science ; éd. Frontiers Media, 2019, vol. 6.https://hal.science/hal-02316446
- [28] D. Eveillard, N. Bouskill, D. Vintache, J. Gras, B. Ward, J. Bourdon. Probabilistic Modeling of Microbial Metabolic Networks for Integrating Partial Quantitative Knowledge Within the Nitrogen Cycle. In Frontiers in Microbiology ; éd. Frontiers Media, 2019, vol. 9.https://hal.science/hal-01996045
- [29] L. Caputi, Q. Carradec, D. Eveillard, A. Kirilovsky, E. Pelletier, J. Pierella Karlusich, F. Rocha Jimenez Vieira, E. Villar, S. Chaffron, S. Malviya, E. Scalco, S. Acinas, A. Alberti, J. Aury, A. Benoiston, A. Bertrand, T. Biard, L. Bittner, M. Boccara, J. Brum, C. Brunet, G. Busseni, A. Carratalà, H. Claustre, L. Coelho, S. Colin, S. d'Aniello, C. da Silva, M. del Core, H. Doré, S. Gasparini, F. Kokoszka, J. Jamet, C. Lejeusne, C. Lepoivre, M. Lescot, G. Lima-Mendez, F. Lombard, J. Lukeš, N. Maillet, M. Madoui, E. Martinez, M. Mazzocchi, M. Néou, J. Paz-Yepes, J. Poulain, S. Ramondenc, J. Romagnan, S. Roux, D. Salvagio Manta, R. Sanges, S. Speich, M. Sprovieri, S. Sunagawa, V. Taillandier, A. Tanaka, L. Tirichine, C. Trottier, J. Uitz, A. Veluchamy, J. Veselá, F. Vincent, S. Yau, S. Kandels-Lewis, S. Searson, C. Dimier, M. Picheral, P. Bork, E. Boss, C. de Vargas, M. Follows, N. Grimsley, L. Guidi, P. Hingamp, E. Karsenti, P. Sordino, L. Stemmann, M. Sullivan, A. Tagliabue, A. Zingone, L. Garczarek, F. d'Ortenzio, P. Testor, F. Not, M. d'Alcalà, P. Wincker, G. Gorsky, O. Jaillon, L. Karp-Boss, U. Krzic, H. Ogata, S. Pesant, J. Raes, E. Reynaud, C. Sardet, M. Sieracki, D. Velayoudon, J. Weissenbach, C. Bowler, D. Iudicone. Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems. In Global Biogeochemical Cycles ; éd. American Geophysical Union, 2019, vol. 33, num. 3.https://hal.science/hal-02999805
- [30] S. Thiriet-Rupert, G. Carrier, C. Trottier, D. Eveillard, B. Schoefs, G. Bougaran, J. Cadoret, B. Chénais, B. Saint-Jean. Identification of transcription factors involved in the phenotype of a domesticated oleaginous microalgae strain of Tisochrysis lutea. In Algal Research - Biomass, Biofuels and Bioproducts ; éd. Elsevier, 2018, vol. 30.https://hal.science/hal-01677336
- [31] D. d'Alelio, D. Eveillard, V. Coles, L. Caputi, M. Ribera D’alcalà, D. Iudicone. Modelling the complexity of plankton communities exploiting omics potential: From present challenges to an integrative pipeline. In Current Opinion in Systems Biology ; éd. Elsevier, 2018.https://hal.science/hal-01909434
- [32] D. Mandakovic, C. Rojas, J. Maldonado, M. Latorre, D. Travisany, E. Delage, A. Bihouée, G. Jean, F. Diaz, B. Fernández-Gómez, P. Cabrera, A. Gaete, C. Latorre, R. Gutierrez, A. Maass, V. Cambiazo, S. Navarrete, D. Eveillard, M. Gonzalez. Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience. In Scientific Reports ; éd. Nature Publishing Group, 2018, vol. 8, num. 1.https://hal.science/hal-01774624
- [33] J. Laniau, C. Frioux, J. Nicolas, C. Baroukh, M. Cortés, J. Got, C. Trottier, D. Eveillard, A. Siegel. Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks. In PeerJ ; éd. PeerJ, 2017, vol. 5.https://hal.science/hal-01635688
- [34] S. Prigent, C. Frioux, S. Dittami, S. Thiele, A. Larhlimi, G. Collet, G. Fabien, J. Got, D. Eveillard, J. Bourdon, F. Plewniak, T. Tonon, A. Siegel. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks. In PLoS Computational Biology ; éd. PLOS, 2017, vol. 13, num. 1.https://inria.hal.science/hal-01449100
- [35] M. Budinich, J. Bourdon, A. Larhlimi, D. Eveillard. A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems.. In PLoS ONE ; éd. Public Library of Science, 2017, vol. 12, num. 2.https://hal.science/hal-01478375
- [36] F. Thomas, P. Bordron, D. Eveillard, G. Michel. Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses. In Frontiers in Microbiology ; éd. Frontiers Media, 2017, vol. 8.https://hal.science/hal-01613034
- [37] B. Delahaye, D. Eveillard, N. Bouskill. On the Power of Uncertainties in Microbial System Modeling: No Need To Hide Them Anymore. In mSystems, vol. 2, num. 6. 05-12-2017https://hal.science/hal-01658218
- [38] P. Bordron, M. Latorre, M. Cortés, M. Gonzales, S. Thiele, A. Siegel, A. Maass, D. Eveillard. Putative bacterial interactions from metagenomic knowledge with an integrative systems ecology approach. In MicrobiologyOpen ; éd. Wiley, 2016, vol. 5, num. 1.https://inria.hal.science/hal-01246173
- [39] V. Acuña, A. Aravena, C. Guziolowski, D. Eveillard, A. Siegel, A. Maass. Deciphering transcriptional regulations coordinating the response to environmental changes. In BMC Bioinformatics ; éd. BioMed Central, 2016, vol. 17, num. 1.https://hal.science/hal-01260866
- [40] L. Guidi, S. Chaffron, L. Bittner, D. Eveillard, A. Larhlimi, S. Roux, Y. Darzi, S. Audic, L. Berline, J. Brum, L. Coelho, J. Espinoza, S. Malviya, S. Sunagawa, C. Dimier, S. Kandels-Lewis, M. Picheral, J. Poulain, S. Searson, L. Stemmann, F. Not, P. Hingamp, S. Speich, M. Follows, L. Karp-Boss, E. Boss, H. Ogata, S. Pesant, J. Weissenbach, P. Wincker, S. Acinas, P. Bork, D. Iudicone, M. Sullivan, J. Raes, E. Karsenti, C. Bowler, G. Gorsky. Plankton networks driving carbon export in the oligotrophic ocean. In Nature ; éd. Nature Publishing Group, 2016, vol. 532.https://hal.sorbonne-universite.fr/hal-01275276
- [41] A. Mas, S. Jamshidi, Y. Lagadeuc, D. Eveillard, P. Vandenkoornhuyse. Beyond the Black Queen Hypothesis.. In The International Society of Microbiologial Ecology Journal ; éd. Nature Publishing Group, 2016, vol. 10, num. 9.https://hal.science/hal-01290210
- [42] N. Mouquet, Y. Lagadeuc, V. Devictor, L. Doyen, A. Duputié, D. Eveillard, D. Faure, E. Garnier, O. Gimenez, P. Huneman, F. Jabot, P. Jarne, D. Joly, R. Julliard, S. Kéfi, G. Kergoat, S. Lavorel, L. Le Gall, L. Meslin, S. Morand, X. Morin, H. Morlon, G. Pinay, R. Pradel, F. Schurr, W. Thuiller, M. Loreau. Predictive ecology in a changing world. In Journal of Applied Ecology ; éd. Wiley, 2015, vol. 52, num. 5.https://hal.science/hal-01180277
- [43] S. Jamshidi, J. Behm, D. Eveillard, E. Kiers, P. Vandenkoornhuyse. Using hybrid automata modelling to study phenotypic plasticity and allocation strategies in the plant mycorrhizal mutualism. In Ecological Modelling ; éd. Elsevier, 2015, vol. 311.https://hal.science/hal-01157450
- [44] S. E. Newell, D. Eveillard, M. J. Mccarthy, W. S. Gardner, Z. Liu, B. B. Ward. A shift in the archaeal nitrifier community in response to natural and anthropogenic disturbances in the northern Gulf of Mexico. In Environmental Microbiology Reports ; éd. Wiley, 2014, vol. 6, num. 1.https://hal.science/hal-00951509
- [45] S. Dittami, D. Eveillard, T. Tonon. A metabolic approach to study algal-bacterial interactions in changing environments.. In Molecular Ecology ; éd. Wiley, 2014, vol. 23, num. 7.https://hal.science/hal-00936195
- [46] S. Prigent, G. Collet, S. Dittami, L. Delage, F. Ethis de Corny, O. Dameron, D. Eveillard, S. Thiele, J. Cambefort, C. Boyen, A. Siegel, T. Tonon. The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond.. In The Plant Journal ; éd. Wiley, 2014, vol. 80, num. 2.https://hal.science/hal-01057153
- [47] T. Tonon, D. Eveillard. Marine systems biology.. In Frontiers in Genetics ; éd. Frontiers Media, 2014, vol. 6.https://hal.science/hal-01161455
- [48] R. Long, D. Eveillard, S. Franco, E. Reeves, J. Pinckney. Antagonistic interactions between heterotrophic bacteria as a potential regulator of community structure of hypersaline microbial mats.. In FEMS Microbiology Ecology ; éd. Wiley-Blackwell, 2013, vol. 83, num. 1.https://hal.science/hal-00752749
- [49] N. Bouskill, D. Eveillard, D. Chien, A. Jayakumar, B. Ward. Environmental factors determining ammonia-oxidizing organism distribution and diversity in marine environments.. In Environmental Microbiology ; éd. Society for Applied Microbiology and Wiley-Blackwell, 2012, vol. 14, num. 3.https://hal.science/hal-00661746
- [50] N. Bouskill, D. Eveillard, G. O'Mullan, G. Jackson, B. Ward. Seasonal and annual reoccurrence in betaproteobacterial ammonia-oxidizing bacterial population structure.. In Environmental Microbiology ; éd. Society for Applied Microbiology and Wiley-Blackwell, 2011, vol. 13, num. 4.https://hal.science/hal-00626710
- [51] P. Bordron, D. Eveillard, I. Rusu. Integrated analysis of the gene neighbouring impact on bacterial metabolic networks.. In IET Systems Biology ; éd. Institution of Engineering and Technology, 2011, vol. 5, num. 4.https://hal.science/hal-00626709
- [52] E. Gnimpieba, D. Eveillard, J. Guéant, A. Chango. Using logic programming for modeling the one-carbon metabolism network to study the impact of folate deficiency on methylation processes.. In Molecular BioSystems ; éd. Royal Society of Chemistry, 2011, vol. 7, num. 8.https://hal.science/hal-00626712
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