Publication de la collection HAL LS2N-COMBI pour 2024
Nombre de publications retournées : 16ART_INT | COMM_INT | THESE | AUTRES |
---|---|---|---|
11 | 2 | 2 | 1 |
ART_INT | 11 |
---|---|
COMM_INT | 2 |
THESE | 2 |
AUTRES | 1 |
Revues internationales avec comité de lecture (ART_INT)
- [1] I. Deutschmann, E. Delage, C. Giner, M. Sebastián, J. Poulain, J. Arístegui, C. Duarte, S. Acinas, R. Massana, J. Gasol, D. Eveillard, S. Chaffron, R. Logares. Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. In Nature Communications ; éd. Nature Publishing Group, 2024, vol. 15, num. 1.
https://hal.science/hal-04407573v1
- [2] J. Jacquin, M. Budinich, S. Chaffron, V. Barbe, F. Lombard, M. Pedrotti, G. Gorsky, A. ter Halle, S. Bruzaud, M. Kedzierski, J. Ghiglione. Niche partitioning and plastisphere core microbiomes in the two most plastic polluted zones of the world ocean. In Environmental Science and Pollution Research ; éd. Springer Verlag, 2024, vol. 31, num. 28.
https://hal.science/hal-04625794v1
- [3] J. Rolland, R. Boutin, D. Eveillard, B. Delahaye. Datascape: exploring heterogeneous dataspace. In Scientific Reports ; éd. Nature Publishing Group, 2024, vol. 14.
https://hal.science/hal-04674835v1
- [4] N. Giordano, M. Gaudin, C. Trottier, E. Delage, C. Nef, C. Bowler, S. Chaffron. Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. In Nature Communications ; éd. Nature Publishing Group, 2024, vol. 15.
https://hal.science/hal-04682542v1
- [5] A. Lambert, M. Budinich, M. Mahé, D. Eveillard, S. Chaffron. Community metabolic modeling of host-microbiota interactions through multi-objective optimization. In iScience ; éd. Elsevier, 2024, vol. 27, num. 6.
https://hal.science/hal-04674843v1
- [6] G. Siqueira, A. Oliveira, A. Alexandrino, G. Jean, G. Fertin, Z. Dias. Assignment of orthologous genes in unbalanced genomes using cycle packing of adjacency graphs. In Journal of Heuristics ; éd. Springer Verlag, 2024, vol. 30, num. 5-6.
https://hal.science/hal-04914835v1
- [7] M. Bolteau, L. Chebouba, L. David, J. Bourdon, C. Guziolowski. Boolean Network Models of Human Preimplantation Development. In Journal of Computational Biology ; éd. Mary Ann Liebert, 2024, vol. 31, num. 6.
https://hal.science/hal-04673351v1
- [8] M. Gaudin, D. Eveillard, S. Chaffron. Ecological associations distribution modelling of marine plankton at a global scale. In Philosophical Transactions of the Royal Society B: Biological Sciences ; éd. Royal Society, The, 2024, vol. 379.
https://hal.science/hal-04674860v1
- [9] F. Tian, J. Wainaina, C. Howard-Varona, G. Domínguez-Huerta, B. Bolduc, M. Gazitúa, G. Smith, M. Gittrich, O. Zablocki, D. Cronin, D. Eveillard, S. Hallam, M. Sullivan. Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans. In Microbiome ; éd. BioMed Central, 2024, vol. 12, num. 1.
https://hal.science/hal-04683447v1
- [10] G. Fertin, G. Jean, A. Labarre. Sorting genomes by prefix double-cut-and-joins. In Theoretical Computer Science ; éd. Elsevier, 2024, vol. 1024.
https://nantes-universite.hal.science/hal-04901649v1
- [11] G. Fertin, O. Fontaine, G. Jean, S. Vialette. The Maximum Zero-Sum Partition problem. In Theoretical Computer Science ; éd. Elsevier, 2024, vol. 1019.
https://nantes-universite.hal.science/hal-04901397v1
Conférences internationales avec comité de lecture et actes (COMM_INT)
- [12] G. Fertin, E. Monfroy, C. Vasconcellos-Gaete. Best of Both Worlds: Solving the Cyclic Bandwidth Problem by Combining Pre-existing Knowledge and Constraint Programming Techniques. In International Conference on Computational Science - ICCS 24, juillet 2024, Hanoi, Viêt Nam.
https://univ-angers.hal.science/hal-04646116v1
- [13] O. El Khettari, N. Nishida, S. Liu, R. Munne, Y. Yamagata, S. Quiniou, S. Chaffron, Y. Matsumoto. Mention-Agnostic Information Extraction for Ontological Annotation of Biomedical Articles. In Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, août 2024, Bangkok, Thaïlande.
https://hal.science/hal-04916867v1
Theses et HDR (THESE)
- [14] C. Guziolowski. Modeling Biological Networks as Logic Programs.
https://hal.science/tel-04586274v1
- [15] D. Negre. Rationalisation de l’Accès aux Produits Naturels Fongiques par une Approche OSMAC in silico : Cas d’étude avec la modélisation du métabolisme de Penicillium rubens. Thèses : Nantes Université.
https://theses.hal.science/tel-04911127v1
Autres publications (AUTRES)
- [16] O. Julian Esteban-Cantillo, A. Abreu, S. Bourgeois-Gironde, E. Wanek, U. Gurchani, D. Eveillard, R. Casati. Dynamic Oceans, Dynamic Solutions. Rapport technique, 2024 ; BiOCean5D GA# 101059915.
https://hal.science/hal-04867560v1