Publications for the collection HAL LS2N-COMBI for 2020
International journals with reviewing committee (ART_INT)
- [1] A. Oliveira, G. Jean, G. Fertin, K. Brito, L. Bulteau, U. Dias, Z. Dias. Sorting Signed Permutations by Intergenic Reversals. In IEEE/ACM Transactions on Computational Biology and Bioinformatics ; éd. Institute of Electrical and Electronics Engineers, 2020.https://hal.science/hal-02901617v1
- [2] G. Fertin, C. Komusiewicz. Graph Motif Problems Parameterized by Dual. In Journal of Graph Algorithms and Applications ; éd. Brown University, 2020, vol. 24, num. 3.https://hal.science/hal-02901620v1
- [3] H. Mhamdi, J. Bourdon, A. Larhlimi, M. Elloumi. Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks. In Informatics ; éd. MDPI, 2020, vol. 7, num. 1.https://hal.science/hal-02458270v1
- [4] M. Folschette, V. Legagneux, A. Poret, L. Chebouba, C. Guziolowski, N. Théret. A pipeline to create predictive functional networks: application to the tumor progression of hepatocellular carcinoma. In BMC Bioinformatics ; éd. BioMed Central, 2020, vol. 21, num. 1.https://hal.science/hal-02095930v4
- [5] K. Brito, G. Jean, G. Fertin, A. Oliveira, U. Dias, Z. Dias. Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes. In Journal of Computational Biology ; éd. Mary Ann Liebert, 2020, vol. 27, num. 2.https://hal.science/hal-02482109v1
- [6] S. Sunagawa, S. Acinas, P. Bork, C. Bowler, S. Acinas, M. Babin, P. Bork, E. Boss, C. Bowler, G. Cochrane, C. de Vargas, M. Follows, G. Gorsky, N. Grimsley, L. Guidi, P. Hingamp, D. Iudicone, O. Jaillon, S. Kandels, L. Karp-Boss, E. Karsenti, M. Lescot, F. Not, H. Ogata, S. Pesant, N. Poulton, J. Raes, C. Sardet, M. Sieracki, S. Speich, L. Stemmann, M. Sullivan, S. Sunagawa, P. Wincker, D. Eveillard, G. Gorsky, L. Guidi, D. Iudicone, E. Karsenti, F. Lombard, H. Ogata, S. Pesant, M. Sullivan, P. Wincker, C. de Vargas. Tara Oceans: towards global ocean ecosystems biology. In Nature Reviews Microbiology ; éd. Nature Publishing Group, 2020, vol. 18, num. 8.https://hal.science/hal-04394809v1
- [7] A. Murray, N. Avalon, L. Bishop, K. Davenport, E. Delage, A. Dichosa, D. Eveillard, M. Higham, S. Kokkaliari, C. Lo, C. Riesenfeld, R. Young, P. Chain, B. Baker. Uncovering the Core Microbiome and Distribution of Palmerolide in Synoicum adareanum Across the Anvers Island Archipelago, Antarctica. In Marine drugs ; éd. MDPI, 2020, vol. 18, num. 6.https://hal.science/hal-02862365v1
- [8] C. Lemonnier, M. Perennou, D. Eveillard, A. Fernandez-Guerra, A. Leynaert, L. Marié, H. Morrison, L. Mémery, C. Paillard, L. Maignien. Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area. In Frontiers in Marine Science ; éd. Frontiers Media, 2020, vol. 7.https://hal.science/hal-02938091v1
- [9] S. Huet, J. Pouvreau, E. Delage, S. Delgrange, C. Marais, M. Bahut, P. Delavault, P. Simier, L. Poulin. Populations of the Parasitic Plant Phelipanche ramosa Influence Their Seed Microbiota. In Frontiers in Plant Science ; éd. Frontiers, 2020, vol. 11.https://hal.science/hal-03597881v1
- [10] U. Guyet, N. Nguyen, H. Doré, J. Haguait, J. Pittera, M. Conan, M. Ratin, E. Corre, G. Le Corguillé, L. Brillet-Guéguen, M. Hoebeke, C. Six, C. Steglich, A. Siegel, D. Eveillard, F. Partensky, L. Garczarek. Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803. In Frontiers in Microbiology ; éd. Frontiers Media, 2020, vol. 11.https://hal.sorbonne-universite.fr/hal-02929424v1
- [11] A. Murray, J. Freudenstein, S. Gribaldo, R. Hatzenpichler, P. Hugenholtz, P. Kämpfer, K. Konstantinidis, C. Lane, R. Papke, D. Parks, R. Rossello-Mora, M. Stott, I. Sutcliffe, J. Thrash, S. Venter, W. Whitman, S. Acinas, R. Amann, K. Anantharaman, J. Armengaud, B. Baker, R. Barco, H. Bode, E. Boyd, C. Brady, P. Carini, P. Chain, D. Colman, K. Deangelis, M. de Los Rios, P. Estrada-de Los Santos, C. Dunlap, J. Eisen, D. Emerson, T. Ettema, D. Eveillard, P. Girguis, U. Hentschel, J. Hollibaugh, L. Hug, W. Inskeep, E. Ivanova, H. Klenk, W. Li, K. Lloyd, F. Löffler, T. Makhalanyane, D. Moser, T. Nunoura, M. Palmer, V. Parro, C. Pedrós-Alió, A. Probst, T. Smits, A. Steen, E. Steenkamp, A. Spang, F. Stewart, J. Tiedje, P. Vandamme, M. Wagner, F. Wang, P. Yarza, B. Hedlund, A. Reysenbach. Roadmap for naming uncultivated Archaea and Bacteria. In Nature Microbiology ; éd. Nature Publishing Group, 2020, vol. 5, num. 8.https://hal.science/hal-02863761v2
- [12] H. Doré, G. Farrant, U. Guyet, J. Haguait, F. Humily, M. Ratin, F. Pitt, M. Ostrowski, C. Six, L. Brillet-Guéguen, M. Hoebeke, A. Bisch, G. Le Corguillé, E. Corre, K. Labadie, J. Aury, P. Wincker, D. Choi, J. Noh, D. Eveillard, D. Scanlan, F. Partensky, L. Garczarek. Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria. In Frontiers in Microbiology ; éd. Frontiers Media, 2020, vol. 11.https://hal.science/hal-02938656v1
- [13] G. Castel, D. Meistermann, B. Bretin, J. Firmin, J. Blin, S. Loubersac, A. Bruneau, S. Chevolleau, S. Kilens, C. Chariau, A. Gaignerie, Q. Francheteau, H. Kagawa, E. Charpentier, L. Flippe, V. François-Campion, S. Haider, B. Dietrich, M. Knöfler, T. Arima, J. Bourdon, N. Rivron, D. Masson, T. Fournier, H. Okae, T. Fréour, L. David. Induction of human trophoblast stem cells from somatic cells and pluripotent stem cells. In Cell Reports ; éd. Elsevier Inc, 2020, vol. 33.https://hal.science/hal-03493411v1
- [14] S. Ramondenc, D. Eveillard, L. Guidi, F. Lombard, B. Delahaye. Probabilistic modeling to estimate jellyfish ecophysiological properties and size distributions. In Scientific Reports ; éd. Nature Publishing Group, 2020, vol. 10, num. 1.https://hal.science/hal-02539195v1
- [15] A. Oliveira, G. Jean, G. Fertin, K. Brito, U. Dias, Z. Dias. A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions. In 7th International Conference, AlCoB 2020 (Algorithms for Computational Biology ), avril 2020, Missoula, états-Unis.https://hal.science/hal-02528304v1
- [16] N. Sanchez-Pi, L. Marti, A. Abreu, O. Bernard, C. de Vargas, D. Eveillard, A. Maass, P. Marquet, J. Sainte-Marie, J. Salomon, M. Schoenauer, M. Sebag. Artificial Intelligence, Machine Learning and Modeling for Understanding the Oceans and Climate Change. In NeurIPS 2020 Workshop - Tackling Climate Change with Machine Learning, décembre 2020, Santiago / Virtual, Chili.https://hal.science/hal-03138712v1
- [17] D. Eveillard. From Systems Biology to Systems Ecology: A Computational Journey Through Biological Scales. https://hal.science/tel-04385526v1
